PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10037550
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 451aa    MW: 50378.2 Da    PI: 6.1301
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10037550genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-10164204343
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                  + k++rr+++NReAAr+sR RKka++++Le    +L +  +
  Lus10037550 164 SEKVQRRLAQNREAARKSRIRKKAYVKQLESSRLKLIQLEQ 204
                  6799**************************86655555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-8160210No hitNo description
SMARTSM003384.5E-6162225IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.025164208IPR004827Basic-leucine zipper domain
PfamPF001705.5E-7165198IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-7166209No hitNo description
CDDcd147081.17E-20166216No hitNo description
PROSITE patternPS000360169184IPR004827Basic-leucine zipper domain
PfamPF141445.4E-28252327IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
MAMHGSRCYV ILFLFGLEIR SFPDADSSSS SCSKVFESLT IFSLLGSLVL VAGNFLSAVL  60
DGFCLKSKGT RLAISETTMN SPTQFVALGG GMEMYEHVHQ LSMWGESLFK SNGSPNALTS  120
ILIPNTSPSL FISPDIKFDN QSEDTSHGTP GVLTNYEQEV TKSSEKVQRR LAQNREAARK  180
SRIRKKAYVK QLESSRLKLI QLEQELDKAR QQGSYIDNAV EGSNVGFNSA INSGIATFEM  240
EYVNWLEEQQ RHVSELRTAL NSDISDREIH VFVDASLNHY YELFRMKAAA SKADVFYVMY  300
GLWKSSAERF FLWIGGFRPS ELIKILRPQI EPLAEPQLQD ICNLGQLCQQ AEDALSQGME  360
RLQQTLAQSV ADGQLGEASY SPQIDTAMEK LDSLVRFVRQ ADHLRKVALV QVSQILTPRQ  420
AARGLQALGE YFDKLRALSQ VWETNVREPS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012075186.10.0PREDICTED: transcription factor TGA1-like
SwissprotQ392371e-155TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A067KGJ60.0A0A067KGJ6_JATCU; Uncharacterized protein
STRINGPOPTR_0007s06180.11e-173(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-156bZIP family protein